Chris/Eric,
We tried turning on RSTP on the netonix switches and they said it was not working. However should we instead tried using STP? The following post on another forum (I may be misunderstanding) seemed to say that PVST+ compatibility is accomplished via STP on other switches?
https://support.avaya.com/forums/showthread.php?t=4474 "When PVST+ is configured, it uses by default, normal STP BPDU’s on VLAN 1 and PVST BPDUs for other VLANs. This allows a PVST+ switch to connect to a switch using IEEE 802.1Q spanning tree as a tunnels for PVST. PVST+ BPDU’s are tunneled across the 802.1Q VLAN region as multicast data. The single STP is addressed to the well-known STP MAC address 01-80-C2-00-00-00. The PVST BPDUs for other VLANs are addressed to multicast address 01-00-0C-CC-CC-CD.
Coming to the Native VLAN:
If you are not tagging the native VLAN from Cisco, then on the ERS4500 side, you need to have the port mode Trunk All and Untag PVID option enabled on the port and PVID on port is native VLAN of Cisco. Else this frames may get discarded."
Also should we have then possibly set my ports to instead of Untagged Vlan 1, Trunk 1-3999 and set them to either Tagged VLAN 1 Trunk 1-3999 or maybe Q in Q vlan 1? Cisco treats VLAN 1 differently than most other networking equipment.